SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5wsub_ (5wsu B:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1994319Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 1994320Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 1994753Family a.39.1.5: Calmodulin-like [47502] (24 protein domains)
    Duplication: made with two pairs of EF-hands
  6. 1994810Protein Calmodulin [47516] (12 species)
  7. 1994893Species Human (Homo sapiens) [TaxId:9606] [47517] (85 PDB entries)
    Uniprot P02593
  8. 2291980Domain d5wsub_: 5wsu B: [335281]
    automated match to d3g43b_

Details for d5wsub_

PDB Entry: 5wsu (more details), 3 Å

PDB Description: crystal structure of myosin viia iq5-sah in complex with apo-cam
PDB Compounds: (B:) calmodulin

SCOPe Domain Sequences for d5wsub_:

Sequence, based on SEQRES records: (download)

>d5wsub_ a.39.1.5 (B:) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}
lteeqiaefkeafslfdkdgdgtittkelgtvmrslgqnpteaelqdminevdadgngti
dfpefltmmarkmkdtdseeeireafrvfdkdgngyisaaelrhvmtnlgekltdeevde
mireadidgdgqvnyeefvqmmta

Sequence, based on observed residues (ATOM records): (download)

>d5wsub_ a.39.1.5 (B:) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}
lteeqiaefkeafslfdkdgdgtittkelgtvmrslgqnpteaelqdminevngtidfpe
fltmmarkmkdseeeireafrvfdkdgngyisaaelrhvmtnlgekltdeevdemiread
gqvnyeefvqmmta

SCOPe Domain Coordinates for d5wsub_:

Click to download the PDB-style file with coordinates for d5wsub_.
(The format of our PDB-style files is described here.)

Timeline for d5wsub_:

  • d5wsub_ appears in periodic updates to SCOPe 2.06 starting on 2017-06-08

View in 3D
Domains from other chains:
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d5wsua_