Lineage for d5vb6a1 (5vb6 A:265-513)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2009679Family a.123.1.0: automated matches [191623] (1 protein)
    not a true family
  6. 2009680Protein automated matches [191142] (6 species)
    not a true protein
  7. 2009693Species Human (Homo sapiens) [TaxId:9606] [189274] (53 PDB entries)
  8. 2291967Domain d5vb6a1: 5vb6 A:265-513 [335268]
    Other proteins in same PDB: d5vb6a2
    automated match to d1xdkb_
    complexed with 927, na

Details for d5vb6a1

PDB Entry: 5vb6 (more details), 2.04 Å

PDB Description: x-ray co-structure of nuclear receptor ror-gammat ligand binding domain with an inverse agonist and src2 peptide
PDB Compounds: (A:) Nuclear receptor ROR-gamma, SRC2 chimera

SCOPe Domain Sequences for d5vb6a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vb6a1 a.123.1.0 (A:265-513) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aslteiehlvqsvcksyretcqlrledllrqrsnifsreevtgyqrksmwemwercahhl
teaiqyvvefakrlsgfmelcqndqivllkagamevvlvrmcraynadnrtvffegkygg
melfralgcselissifdfshslsalhfsedeialytalvlinahrpglqekrkveqlqy
nlelafhhhlckthrqsilaklppkgklrslcsqhverlqifqhlhpivvqaafpplyke
lfsgggekh

SCOPe Domain Coordinates for d5vb6a1:

Click to download the PDB-style file with coordinates for d5vb6a1.
(The format of our PDB-style files is described here.)

Timeline for d5vb6a1:

  • d5vb6a1 appears in periodic updates to SCOPe 2.06 starting on 2017-06-08

View in 3D
Domains from same chain:
(mouse over for more information)
d5vb6a2