SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Burkholderia ambifaria [TaxId: 398577]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2070786Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2071232Family b.82.2.0: automated matches [191672] (1 protein)
    not a true family
  6. 2071233Protein automated matches [191281] (13 species)
    not a true protein
  7. 2291927Species Burkholderia ambifaria [TaxId:398577] [335228] (1 PDB entry)

PDB entry in Species: Burkholderia ambifaria [TaxId: 398577]:

More info for Species Burkholderia ambifaria [TaxId:398577] from b.82.2.0 automated matches

Timeline for Species Burkholderia ambifaria [TaxId:398577] from b.82.2.0 automated matches:

  • Species Burkholderia ambifaria [TaxId:398577] from b.82.2.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-06-08