SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Cryptococcus neoformans [TaxId: 235443]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2116932Fold c.47: Thioredoxin fold [52832] (2 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
  4. 2116933Superfamily c.47.1: Thioredoxin-like [52833] (24 families) (S)
  5. 2118983Family c.47.1.0: automated matches [191312] (1 protein)
    not a true family
  6. 2118984Protein automated matches [190056] (163 species)
    not a true protein
  7. 2291767Species Cryptococcus neoformans [TaxId:235443] [335068] (1 PDB entry)

PDB entry in Species: Cryptococcus neoformans [TaxId: 235443]:

More info for Species Cryptococcus neoformans [TaxId:235443] from c.47.1.0 automated matches

Timeline for Species Cryptococcus neoformans [TaxId:235443] from c.47.1.0 automated matches:

  • Species Cryptococcus neoformans [TaxId:235443] from c.47.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-06-08