Lineage for d5vnda_ (5vnd A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2542179Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
    consists of two alpha+beta domains, C-terminal domain is mostly alpha helical
  4. 2542180Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and PIPK
  5. 2542316Family d.144.1.7: Protein kinases, catalytic subunit [88854] (66 proteins)
    members organized in the groups and subfamiles specified by the comments
  6. 2543630Protein Fibroblast growth factor receptor 1 [56158] (1 species)
    PTK group; FGFR subfamily; membrane spanning protein tyrosine kinase
  7. 2543631Species Human (Homo sapiens) [TaxId:9606] [56159] (46 PDB entries)
  8. 2543678Domain d5vnda_: 5vnd A: [334798]
    automated match to d4v04b_
    complexed with 9es, edo, so4

Details for d5vnda_

PDB Entry: 5vnd (more details), 2.2 Å

PDB Description: crystal structure of fgfr1-y563c (fgfr4 surrogate) covalently bound to h3b-6527
PDB Compounds: (A:) fibroblast growth factor receptor 1

SCOPe Domain Sequences for d5vnda_:

Sequence, based on SEQRES records: (download)

>d5vnda_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
yelpedprwelprdrlvlgkplgegafgqvvlaeaigldkdkpnrvtkvavkmlksdate
kdlsdlisememmkmigkhkniinllgactqdgplyvivecaskgnlreylqarrppgle
ysynpshnpeeqlsskdlvscayqvargmeylaskkcihrdlaarnvlvtednvmkiadf
glardihhidyykkttngrlpvkwmapealfdriythqsdvwsfgvllweiftlggspyp
gvpveelfkllkeghrmdkpsnctnelymmmrdcwhavpsqrptfkqlvedldrivalts
nqe

Sequence, based on observed residues (ATOM records): (download)

>d5vnda_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
yelpedprwelprdrlvlgkplgegafgqvvlaeaigldkdkpnrvtkvavkmlksdate
kdlsdlisememmkmigkhkniinllgactqdgplyvivecaskgnlreylqarrppgle
ysynpshnpeeqlsskdlvscayqvargmeylaskkcihrdlaarnvlvtednvmkiadf
glardhhidyykkttngrlpvkwmapealfdriythqsdvwsfgvllweiftlggspypg
vpveelfkllkeghrmdkpsnctnelymmmrdcwhavpsqrptfkqlvedldrivaltsn
qe

SCOPe Domain Coordinates for d5vnda_:

Click to download the PDB-style file with coordinates for d5vnda_.
(The format of our PDB-style files is described here.)

Timeline for d5vnda_: