SCOPe 2.08: Domain d5vnxb_: 5vnx B:

Lineage for d5vnxb_ (5vnx B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (166 species)
   not a true protein

7. Species Burkholderia multivorans [TaxId:395019] [334355] (1 PDB entry)

8. Domain d5vnxb_: 5vnx B: [334558]
   automated match to d5jayb_
   complexed with ben, edo, so4

Details for d5vnxb_

PDB Entry: 5vnx, 1.65 Å

PDB Description: crystal structure of an 8-amino-7-oxononanoate synthase from burkholderia multivorans with a potential glycine-plp-lys242 cyclized intermediate or byproduct

PDB Compounds: (B:) 8-amino-7-oxononanoate synthase

SCOPe Domain Sequences for d5vnxb_:

Sequence; same for both SEQRES and ATOM records:

>d5vnxb_ c.67.1.0 (B:) automated matches {Burkholderia multivorans [TaxId: 395019]}
nlldtlqrgladldaqglrrvrrtadsacdahmtvngreivgfasndylglaahpklvaa
faegaqrygsgsggshllgghsrahakledelagfaggfsdapralyfstgymanlaavt
alagkdatifsdalnhaslidgtrlsratvqvyphadtatlgalleactsqtklivtdtv
fsmdgdiaplaellalaerhgawlvvddahgfgvlgpqgrgalaaaalrsphlvyvgtlg
xaagvagafvvahetviewliqrarsyifttaappavahavsaslkviagdegdarrahl
aaliertrallrrtrwqpvdshtavqplvigsneatlaamraldahglwvpairpptvpa
gtsrlrislsaahsfddlarletallraseea

Timeline for d5vnxb_:

• d5vnxb_ first appeared in SCOPe 2.06
  
• d5vnxb_ appears in SCOPe 2.07