Lineage for d5n0ya3 (5n0y A:294-663)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2974297Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 2974298Superfamily d.126.1: Pentein [55909] (8 families) (S)
  5. 2974363Family d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111152] (1 protein)
    # functionally related to the amidinotransferase, similar active sites
    automatically mapped to Pfam PF03068
  6. 2974364Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111153] (1 species)
  7. 2974365Species Human (Homo sapiens) [TaxId:9606] [111154] (17 PDB entries)
    Uniprot Q9UM07
  8. 2974375Domain d5n0ya3: 5n0y A:294-663 [334522]
    Other proteins in same PDB: d5n0ya1, d5n0ya2
    automated match to d1wd8a3
    complexed with 8fq, ca, so4

Details for d5n0ya3

PDB Entry: 5n0y (more details), 2.23 Å

PDB Description: hpad4 crystal complex with afm-30a
PDB Compounds: (A:) Protein-arginine deiminase type-4

SCOPe Domain Sequences for d5n0ya3:

Sequence; same for both SEQRES and ATOM records: (download)

>d5n0ya3 d.126.1.5 (A:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
apwimtpntqppqevyacsifenedflksvttlamkakcklticpeeenmddqwmqdeme
igyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrgpqtggisgldsfgnlevs
ppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqqvqapvklysdwlsvghvd
eflsfvpapdrkgfrlllasprscyklfqeqqneghgeallfegikkkkqqkiknilsnk
tlrehnsfvercidwnrellkrelglaesdiidipqlfklkefskaeaffpnmvnmlvlg
khlgipkpfgpvingrccleekvcslleplglqctfindfftyhirhgevhcgtnvrrkp
fsfkwwnmvp

SCOPe Domain Coordinates for d5n0ya3:

Click to download the PDB-style file with coordinates for d5n0ya3.
(The format of our PDB-style files is described here.)

Timeline for d5n0ya3: