Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein automated matches [190260] (29 species) not a true protein |
Species Hepatitis c virus genotype 1b (isolate con1) [TaxId:333284] [331357] (7 PDB entries) |
Domain d5pzka_: 5pzk A: [334263] automated match to d3q0za_ protein/RNA complex; complexed with 23e, 2n5, gol, pg4, so4 |
PDB Entry: 5pzk (more details), 2.2 Å
SCOPe Domain Sequences for d5pzka_:
Sequence, based on SEQRES records: (download)
>d5pzka_ e.8.1.4 (A:) automated matches {Hepatitis c virus genotype 1b (isolate con1) [TaxId: 333284]} smsytwtgalitpcaaeetklpinalsnsllrhhnlvyattsrsaslrqkkvtfdrlqvl ddhyrdvlkemkakastvkakllsveeackltpphsarskfgygakdvrnlsskavnhir svwkdlledtetpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvvs tlpqavmgssygfqyspgqrveflvnawkakkcpmgfaydtrcfdstvtendirveesiy qccdlapearqairslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkaa aacraaklqdctmlvcgddlvvicesagtqedeaslrafteamtrysappgdppkpeydl elitscssnvsvahdasgkrvyyltrdpttplaraawetarhtpvnswlgniimyaptlw armilmthffsillaqeqlekaldcqiygacysiepldlpqiiqrlhglsafslhsyspg einrvasclrklgvpplrvwrhrarsvrarllsqggraatcgkylfnwavrtklkltpip aasqldlsswfvagysggdiyhs
>d5pzka_ e.8.1.4 (A:) automated matches {Hepatitis c virus genotype 1b (isolate con1) [TaxId: 333284]} smsytwtgalitpcvyattsrsaslrqkkvtfdrlqvlddhyrdvlkemkakastvkakl lsveeackltpphsarskfgygakdvrnlsskavnhirsvwkdlledtetpidttimakn evfcvqpekggrkparlivfpdlgvrvcekmalydvvstlpqavmgssygfqyspgqrve flvnawkakkcpmgfaydtrcfdstvtendirveesiyqccdlapearqairslterlyi ggpltnskgqncgyrrcrasgvlttscgntltcylkaaaacraaklqdctmlvcgddlvv icesagtqedeaslrafteamtrysappgdppkpeydlelitscssnvsvahdasgkrvy yltrdpttplaraawetarhtpvnswlgniimyaptlwarmilmthffsillaqeqleka ldcqiygacysiepldlpqiiqrlhglsafslhsyspgeinrvasclrklgvpplrvwrh rarsvrarllsqggraatcgkylfnwavrtklkltpipaasqldlsswfvagysggdiyh s
Timeline for d5pzka_: