SCOPe 2.08: Domain d5va8d1: 5va8 D:1-259

Lineage for d5va8d1 (5va8 D:1-259)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Paraburkholderia phymatum [TaxId:391038] [333644] (2 PDB entries)

8. Domain d5va8d1: 5va8 D:1-259 [333673]
   Other proteins in same PDB: d5va8a2, d5va8b2, d5va8c2, d5va8d2
   automated match to d5idxb_
   complexed with mpo, nap, tce

Details for d5va8d1

PDB Entry: 5va8, 1.6 Å

PDB Description: crystal structure of short-chain dehydrogenase/reductase sdr from burkholderia phymatum in complex with nadp

PDB Compounds: (D:) Short-chain dehydrogenase/reductase SDR

SCOPe Domain Sequences for d5va8d1:

Sequence; same for both SEQRES and ATOM records:

>d5va8d1 c.2.1.0 (D:1-259) automated matches {Paraburkholderia phymatum [TaxId: 391038]}
mdlgiagksalvcaaskglgrgcaealaaegvnvtivartpetldataaairanagvdvq
avacdittpegraaalaacpqpdilvnnaggpppgdfrnfthddwiraleanmltpieli
ratidgmisrgfgrvvnitsssvkapidvlglsngarsgltgfiagvarkvapngvtinn
llpgifdtdriavtfdaaakaqnisvdearkqrmatiparrfgtpdefgracaflcsvha
gyitgqnwlidggaypgty

Timeline for d5va8d1:

• d5va8d1 first appeared in SCOPe 2.06
  
• d5va8d1 appears in SCOPe 2.07