Lineage for d5vbfa_ (5vbf A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2140671Fold c.82: ALDH-like [53719] (1 superfamily)
    consists of two similar domains with 3 layers (a/b/a) each; duplication
    core: parallel beta-sheet of 5 strands, order 32145
  4. 2140672Superfamily c.82.1: ALDH-like [53720] (3 families) (S)
    binds NAD differently from other NAD(P)-dependent oxidoreductases
  5. 2141090Family c.82.1.0: automated matches [191448] (1 protein)
    not a true family
  6. 2141091Protein automated matches [190683] (49 species)
    not a true protein
  7. 2289742Species Burkholderia vietnamiensis [TaxId:60552] [333043] (1 PDB entry)
  8. 2289803Domain d5vbfa_: 5vbf A: [333104]
    automated match to d1t90a_
    complexed with fmt, gol, mes, unx

Details for d5vbfa_

PDB Entry: 5vbf (more details), 2.35 Å

PDB Description: crystal structure of succinate semialdehyde dehydrogenase from burkholderia vietnamiensis
PDB Compounds: (A:) NAD-dependent succinate-semialdehyde dehydrogenase

SCOPe Domain Sequences for d5vbfa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vbfa_ c.82.1.0 (A:) automated matches {Burkholderia vietnamiensis [TaxId: 60552]}
rhdyaplrlyidgrfhdadgrrtqpvvdpgttrvlgelphatahdidaavqaahrafvtw
rhesplvrsdllrraaalareraetigrhitmdqgkplreaiaevvsaaeqlewhaeegr
rtygrvvparspdvmqtvlrepigvcaafspwnfpfsqamhkiaaalasgctlvlkgpee
spsaivalaqlfhdaglppgclnivwgvpgdvskqlieapqvrkisftgsvpvgkqlaal
aaslmkrmtmelgghapvlvcadadveraaamlaaykfrnagqvcvsptrffvqraafdr
fvcayldavgtirvgygldagvtmgplaharrvdeidafvadatakgaqiatggmrlpgp
ghyfaptvvlgptrdtrlmndepfgpivgivpfddlddalaeanrlpfglasyafttsar
nahrisraleagmvninhfgmgpaeipfggvkdsgfgseggmeafdgylvtkfvtqmn

SCOPe Domain Coordinates for d5vbfa_:

Click to download the PDB-style file with coordinates for d5vbfa_.
(The format of our PDB-style files is described here.)

Timeline for d5vbfa_:

  • d5vbfa_ appears in periodic updates to SCOPe 2.06 starting on 2017-04-13