SCOPe 2.06: Domain d5v9ha2: 5v9h A:260-622

Lineage for d5v9ha2 (5v9h A:260-622)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.91: PEP carboxykinase-like [53794] (1 superfamily)
   contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side

4. Superfamily c.91.1: PEP carboxykinase-like [53795] (3 families)

5. Family c.91.1.1: PEP carboxykinase C-terminal domain [53796] (3 proteins)

6. Protein Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) [69612] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [225316] (40 PDB entries)

8. Domain d5v9ha2: 5v9h A:260-622 [333050]
   Other proteins in same PDB: d5v9ha1, d5v9hb1
   automated match to d3dtba2
   complexed with 1pe, gdp, mn, na, pga

Details for d5v9ha2

PDB Entry: 5v9h, 2.15 Å

PDB Description: structure of the h477r variant of rat cytosolic pepck in complex with phosphoglycolate and gdp.

PDB Compounds: (A:) Phosphoenolpyruvate carboxykinase, cytosolic [GTP]

SCOPe Domain Sequences for d5v9ha2:

Sequence, based on SEQRES records:

>d5v9ha2 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpa
gvplvyealswqhgvfvgaamrseataaaehkgkvimrdpfamrpffgynfgkylahwls
mahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigyvp
kedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqri
sqm

Sequence, based on observed residues (ATOM records):

>d5v9ha2 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpa
gvplvyealswqhgvfvgaamrseataaaehkgkvimrdpfamrpffgynfgkylahwls
mahrpaaklpkifhvnwfrkflwpgfgensrvlewmfgriegedsakltpigyvpkedal
nlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqrisqm

Timeline for d5v9ha2:

• d5v9ha2 is new in SCOPe 2.06-stable
  
• d5v9ha2 appears in SCOPe 2.07
  
• d5v9ha2 appears in the current release, SCOPe 2.08