SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5v4df2 (5v4d F:1-1)

  1. Root: SCOPe 2.06
  2. 2245868Class l: Artifacts [310555] (1 fold)
  3. 2245869Fold l.1: Tags [310573] (1 superfamily)
  4. 2245870Superfamily l.1.1: Tags [310607] (1 family) (S)
  5. 2245871Family l.1.1.1: Tags [310682] (2 protein domains)
  6. 2251949Protein N-terminal Tags [310894] (1 species)
  7. 2251950Species Synthetic [311501] (10277 PDB entries)
  8. 2289564Domain d5v4df2: 5v4d F:1-1 [332865]
    Other proteins in same PDB: d5v4da1, d5v4db1, d5v4dc1, d5v4dd1, d5v4de1, d5v4df1
    complexed with acy, ca, gol

Details for d5v4df2

PDB Entry: 5v4d (more details), 1.6 Å

PDB Description: crystal structure of the protein of unknown function of the conserved rid protein family yyfa from yersinia pestis
PDB Compounds: (F:) Putative translational inhibitor protein

SCOPe Domain Sequences for d5v4df2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5v4df2 l.1.1.1 (F:1-1) N-terminal Tags {Synthetic}
a

SCOPe Domain Coordinates for d5v4df2:

Click to download the PDB-style file with coordinates for d5v4df2.
(The format of our PDB-style files is described here.)

Timeline for d5v4df2:

  • d5v4df2 appears in periodic updates to SCOPe 2.06 starting on 2017-04-06