Lineage for Species: Yersinia pestis [TaxId: 632]
- Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds) 
Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the restSuperfamily d.79.1: YjgF-like [55298] (4 families) 
forms trimers with three closely packed beta-sheets; possibly related to the IspF (d.79.5) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
Family d.79.1.0: automated matches [191544] (1 protein)
not a true familyProtein automated matches [190935] (24 species)
not a true protein
Species Yersinia pestis [TaxId:632] [332774] (1 PDB entry)
PDB entry in Species: Yersinia pestis [TaxId: 632]:
- Domain(s) for 5v4d:
Domain d5v4da1: 5v4d A:2-126 [332830]
Other proteins in same PDB: d5v4da2, d5v4db2, d5v4dc2, d5v4dd2, d5v4de2, d5v4df2
automated match to d3v4da_
complexed with acy, ca, gol
Domain d5v4db1: 5v4d B:2-126 [332775]
Other proteins in same PDB: d5v4da2, d5v4db2, d5v4dc2, d5v4dd2, d5v4de2, d5v4df2
automated match to d3v4da_
complexed with acy, ca, gol
Domain d5v4dc1: 5v4d C:2-126 [332837]
Other proteins in same PDB: d5v4da2, d5v4db2, d5v4dc2, d5v4dd2, d5v4de2, d5v4df2
automated match to d3v4da_
complexed with acy, ca, gol
Domain d5v4dd1: 5v4d D:2-126 [332826]
Other proteins in same PDB: d5v4da2, d5v4db2, d5v4dc2, d5v4dd2, d5v4de2, d5v4df2
automated match to d3v4da_
complexed with acy, ca, gol
Domain d5v4de1: 5v4d E:2-126 [332844]
Other proteins in same PDB: d5v4da2, d5v4db2, d5v4dc2, d5v4dd2, d5v4de2, d5v4df2
automated match to d3v4da_
complexed with acy, ca, gol
Domain d5v4df1: 5v4d F:2-126 [332864]
Other proteins in same PDB: d5v4da2, d5v4db2, d5v4dc2, d5v4dd2, d5v4de2, d5v4df2
automated match to d3v4da_
complexed with acy, ca, gol
More info for Species Yersinia pestis [TaxId:632] from d.79.1.0 automated matches
Timeline for Species Yersinia pestis [TaxId:632] from d.79.1.0 automated matches:
- Species Yersinia pestis [TaxId:632] from d.79.1.0 automated matches first appeared in SCOPe 2.06
- Species Yersinia pestis [TaxId:632] from d.79.1.0 automated matches appears in SCOPe 2.07