SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Yersinia pestis [TaxId: 632]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2180205Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 2180206Superfamily d.79.1: YjgF-like [55298] (3 families) (S)
    forms trimers with three closely packed beta-sheets; possibly related to the IspF (d.79.5) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. 2180410Family d.79.1.0: automated matches [191544] (1 protein)
    not a true family
  6. 2180411Protein automated matches [190935] (13 species)
    not a true protein
  7. 2289473Species Yersinia pestis [TaxId:632] [332774] (1 PDB entry)

PDB entry in Species: Yersinia pestis [TaxId: 632]:

More info for Species Yersinia pestis [TaxId:632] from d.79.1.0 automated matches

Timeline for Species Yersinia pestis [TaxId:632] from d.79.1.0 automated matches:

  • Species Yersinia pestis [TaxId:632] from d.79.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-04-06