Lineage for d5thbd_ (5thb D:)

  1. Root: SCOPe 2.06
  2. 2237529Class h: Coiled coil proteins [57942] (7 folds)
  3. 2238933Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
    core: trimeric coiled coil
  4. 2238934Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families) (S)
  5. 2238935Family h.3.1.1: Influenza hemagglutinin (stalk) [58065] (2 protein domains)
  6. 2239322Protein automated matches [254646] (34 species)
    not a true protein
  7. 2239410Species Influenza A virus [TaxId:11320] [255822] (24 PDB entries)
  8. 2289416Domain d5thbd_: 5thb D: [332717]
    Other proteins in same PDB: d5thba_, d5thbc_, d5thbe_
    automated match to d3m5jb_
    complexed with bma, man, nag; mutant

Details for d5thbd_

PDB Entry: 5thb (more details), 2.41 Å

PDB Description: crystal structure of h10 hemagglutinin mutant (t193d-q226l-g228s) from jiangxi-donghu (2013) h10n8 influenza virus
PDB Compounds: (D:) Hemagglutinin HA2 chain

SCOPe Domain Sequences for d5thbd_:

Sequence, based on SEQRES records: (download)

>d5thbd_ h.3.1.1 (D:) automated matches {Influenza A virus [TaxId: 11320]}
lfgaiagflengwegmvdgwygfrhqnaqgtgqaadykstqaaidqitgklnrlvektnt
efesiesefseiehqignvinwtkdsitdiwtyqaellvamenqhtidmadsemlnlyer
vrkqlrqnaeedgkgcfeiyhacddscmesirnntydhsqyreeallnrln

Sequence, based on observed residues (ATOM records): (download)

>d5thbd_ h.3.1.1 (D:) automated matches {Influenza A virus [TaxId: 11320]}
lfgaiagflengwegmvdgwygfrhqnaqgtgqaadykstqaaidqitgklnrlvektef
esiesefseiehqignvinwtkdsitdiwtyqaellvamenqhtidmadsemlnlyervr
kqlrqnaeedgkgcfeiyhacddscmesirnntydhsqyreeallnrln

SCOPe Domain Coordinates for d5thbd_:

Click to download the PDB-style file with coordinates for d5thbd_.
(The format of our PDB-style files is described here.)

Timeline for d5thbd_:

  • d5thbd_ appears in periodic updates to SCOPe 2.06 starting on 2017-04-06