SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2034780Fold b.3: Prealbumin-like [49451] (7 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands to common fold
  4. 2034930Superfamily b.3.2: Carboxypeptidase regulatory domain-like [49464] (3 families) (S)
  5. 2034939Family b.3.2.2: Pre-dockerin domain [141082] (2 protein domains)
    PfamB PB085396
  6. 2289306Protein automated matches [332607] (1 species)
    not a true protein

Species:

More info for Protein automated matches from b.3.2.2: Pre-dockerin domain

Timeline for Protein automated matches from b.3.2.2: Pre-dockerin domain:

  • Protein automated matches from b.3.2.2: Pre-dockerin domain appears in periodic updates to SCOPe 2.06 starting on 2017-04-05