SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Escherichia coli [TaxId: 83333]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2173456Superfamily d.58.5: GlnB-like [54913] (6 families) (S)
    form timeric structures with the orthogonally packed beta-sheets
  5. 2173457Family d.58.5.1: Prokaryotic signal transducing protein [54914] (4 protein domains)
  6. 2173463Protein PII (product of glnB) [54915] (8 species)
    trimer with orthogonal packing of beta-sheets around the threefold axis
  7. 2289300Species Escherichia coli [TaxId:83333] [332601] (1 PDB entry)

PDB entry in Species: Escherichia coli [TaxId: 83333]:

More info for Species Escherichia coli [TaxId:83333] from d.58.5.1 PII (product of glnB)

Timeline for Species Escherichia coli [TaxId:83333] from d.58.5.1 PII (product of glnB):

  • Species Escherichia coli [TaxId:83333] from d.58.5.1 PII (product of glnB) appears in periodic updates to SCOPe 2.06 starting on 2017-04-05