SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Thermoplasma acidophilum [TaxId: 2303]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2140671Fold c.82: ALDH-like [53719] (1 superfamily)
    consists of two similar domains with 3 layers (a/b/a) each; duplication
    core: parallel beta-sheet of 5 strands, order 32145
  4. 2140672Superfamily c.82.1: ALDH-like [53720] (3 families) (S)
    binds NAD differently from other NAD(P)-dependent oxidoreductases
  5. 2141090Family c.82.1.0: automated matches [191448] (1 protein)
    not a true family
  6. 2141091Protein automated matches [190683] (42 species)
    not a true protein
  7. 2289258Species Thermoplasma acidophilum [TaxId:2303] [332559] (1 PDB entry)

PDB entry in Species: Thermoplasma acidophilum [TaxId: 2303]:

More info for Species Thermoplasma acidophilum [TaxId:2303] from c.82.1.0 automated matches

Timeline for Species Thermoplasma acidophilum [TaxId:2303] from c.82.1.0 automated matches:

  • Species Thermoplasma acidophilum [TaxId:2303] from c.82.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-04-05