SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Brucella abortus [TaxId: 430066]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2139769Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214
  4. 2139770Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families) (S)
  5. 2140083Family c.79.1.0: automated matches [191338] (1 protein)
    not a true family
  6. 2140084Protein automated matches [190215] (29 species)
    not a true protein
  7. 2289246Species Brucella abortus [TaxId:430066] [332547] (2 PDB entries)

PDB entries in Species: Brucella abortus [TaxId: 430066]:

  1. Domain(s) for 5jis:
    1. 2289283Domain d5jisa_: 5jis A: [332584]
      automated match to d4airb_
    2. 2289570Domain d5jisb_: 5jis B: [332871]
      automated match to d4airb_
  2. Domain(s) for 5jjc:
    1. 2289247Domain d5jjcd_: 5jjc D: [332548]
      automated match to d4airb_
      mutant
    2. 2289249Domain d5jjca_: 5jjc A: [332550]
      automated match to d4airb_
      mutant
    3. 2289250Domain d5jjcb_: 5jjc B: [332551]
      automated match to d4airb_
      mutant
    4. 2289257Domain d5jjcc_: 5jjc C: [332558]
      automated match to d4airb_
      mutant

More info for Species Brucella abortus [TaxId:430066] from c.79.1.0 automated matches

Timeline for Species Brucella abortus [TaxId:430066] from c.79.1.0 automated matches:

  • Species Brucella abortus [TaxId:430066] from c.79.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-04-05