SCOPe 2.08: Domain d5ukfd_: 5ukf D:

Lineage for d5ukfd_ (5ukf D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
   consists of two alpha+beta domains, C-terminal domain is mostly alpha helical

4. Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families)
   shares functional and structural similarities with the ATP-grasp fold and PIPK

5. Family d.144.1.0: automated matches [191359] (1 protein)
   not a true family

6. Protein automated matches [190417] (37 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187294] (1476 PDB entries)

8. Domain d5ukfd_: 5ukf D: [332494]
   automated match to d3op5a_
   complexed with 8e1, cl, peg, po4

Details for d5ukfd_

PDB Entry: 5ukf, 2.4 Å

PDB Description: crystal structure of the human vaccinia-related kinase 1 bound to an oxindole inhibitor

PDB Compounds: (D:) Serine/threonine-protein kinase VRK1

SCOPe Domain Sequences for d5ukfd_:

Sequence, based on SEQRES records:

>d5ukfd_ d.144.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vglpigqggfgciyladmnssesvgsdapcvvkvepsdngplftelkfyqraakpeqiqk
wirtrklkylgvpkywgsglhdkngksyrfmimdrfgsdlqkiyeanakrfsrktvlqls
lrildileyiheheyvhgdikasnlllnyknpdqvylvdyglayrycpegvhkayaadpk
rchdgtieftsidahngvapsrrgdleilgycmiqwltghlpwednlkdpkyvrdskiry
reniaslmdkcfpaanapgeiakymetvklldytekplyenlrdillqglkaigskddgk
ldl

Sequence, based on observed residues (ATOM records):

>d5ukfd_ d.144.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vglpciyladvvkvgplftelkfyqraakpeqiqkwirtrklkylgvpkywgsgfmimdr
fgsdlqkiyeanakrfsrktvlqlslrildileyiheheyvhgdikasnlllnyknpdqv
ylvdyglayrycpegvhkayaadpkrchdgtieftsidahngvapsrrgdleilgycmiq
wltghlpwednlkdpkyvrdskiryreniaslmdkcfpaanapgeiakymetvklldyte
kplyenlrdillqglkaigskddgkldl

Timeline for d5ukfd_:

• d5ukfd_ first appeared in SCOPe 2.06
  
• d5ukfd_ appears in SCOPe 2.07