SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5iw1b1 (5iw1 B:3-111)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2026644Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2026645Protein automated matches [190740] (25 species)
    not a true protein
  7. 2026747Species Human (Homo sapiens) [TaxId:9606] [187920] (831 PDB entries)
  8. 2289162Domain d5iw1b1: 5iw1 B:3-111 [332463]
    Other proteins in same PDB: d5iw1c1
    automated match to d3mffb1

Details for d5iw1b1

PDB Entry: 5iw1 (more details), 3 Å

PDB Description: crystal structure of b4.2.3 t-cell receptor
PDB Compounds: (B:) T-cell receptor beta chain

SCOPe Domain Sequences for d5iw1b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5iw1b1 b.1.1.0 (B:3-111) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vtqmprylikrmgenvllecgqdmshetmywyrqdpglglqliyisydvdsnsegdipkg
yrvsrkkrehfslildsaktnqtsvyfcasslghtevffgkgtrltvve

SCOPe Domain Coordinates for d5iw1b1:

Click to download the PDB-style file with coordinates for d5iw1b1.
(The format of our PDB-style files is described here.)

Timeline for d5iw1b1:

  • d5iw1b1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-30