Lineage for d5k3oc_ (5k3o C:)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2160192Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
    consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
    Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
    Domain 2 has parallel beta-sheet of 4 strands, order 1234
  4. 2160193Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families) (S)
  5. 2160194Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
    automatically mapped to Pfam PF00710
  6. 2160195Protein Asparaginase type II [53776] (5 species)
  7. 2160257Species Wolinella succinogenes [TaxId:273121] [332353] (4 PDB entries)
  8. 2160266Domain d5k3oc_: 5k3o C: [332438]
    automated match to d1wsaa_
    complexed with asp

Details for d5k3oc_

PDB Entry: 5k3o (more details), 1.7 Å

PDB Description: wolinella succinogenes l-asparaginase p121 and l-aspartic acid
PDB Compounds: (C:) L-asparaginase

SCOPe Domain Sequences for d5k3oc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5k3oc_ c.88.1.1 (C:) Asparaginase type II {Wolinella succinogenes [TaxId: 273121]}
kpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigsqe
mtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamrpg
ssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspntgk
igtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqagakg
iihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvatesln
pqkarvllmlaltktsdreaiqkifsty

SCOPe Domain Coordinates for d5k3oc_:

Click to download the PDB-style file with coordinates for d5k3oc_.
(The format of our PDB-style files is described here.)

Timeline for d5k3oc_: