Lineage for d5mu8o_ (5mu8 O:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2777171Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2777172Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2777173Family b.22.1.1: TNF-like [49843] (15 proteins)
  6. 2777391Protein Tumor necrosis factor (TNF) [49848] (3 species)
  7. 2777392Species Human (Homo sapiens) [TaxId:9606] [49849] (33 PDB entries)
  8. 2777525Domain d5mu8o_: 5mu8 O: [332426]
    automated match to d1a8ma_
    complexed with jni

Details for d5mu8o_

PDB Entry: 5mu8 (more details), 3 Å

PDB Description: human tnf-alpha in complex with jnj525
PDB Compounds: (O:) Tumor necrosis factor

SCOPe Domain Sequences for d5mu8o_:

Sequence, based on SEQRES records: (download)

>d5mu8o_ b.22.1.1 (O:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
sdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqg
cpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqlek
gdrlsaeinrpdyldfaesgqvyfgiial

Sequence, based on observed residues (ATOM records): (download)

>d5mu8o_ b.22.1.1 (O:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
sdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqg
cpsthvllthtisriavsyqtkvnllsaikspcqreteakpwyepiylggvfqlekgdrl
saeinrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5mu8o_:

Click to download the PDB-style file with coordinates for d5mu8o_.
(The format of our PDB-style files is described here.)

Timeline for d5mu8o_: