Lineage for d5mu8z_ (5mu8 Z:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2041369Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2041370Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2041371Family b.22.1.1: TNF-like [49843] (15 protein domains)
  6. 2041568Protein Tumor necrosis factor (TNF) [49848] (2 species)
  7. 2041569Species Human (Homo sapiens) [TaxId:9606] [49849] (19 PDB entries)
  8. 2289119Domain d5mu8z_: 5mu8 Z: [332420]
    automated match to d1a8ma_
    complexed with jni

Details for d5mu8z_

PDB Entry: 5mu8 (more details), 3 Å

PDB Description: human tnf-alpha in complex with jnj525
PDB Compounds: (Z:) Tumor necrosis factor

SCOPe Domain Sequences for d5mu8z_:

Sequence, based on SEQRES records: (download)

>d5mu8z_ b.22.1.1 (Z:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
sdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqg
cpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqlek
gdrlsaeinrpdyldfaesgqvyfgiial

Sequence, based on observed residues (ATOM records): (download)

>d5mu8z_ b.22.1.1 (Z:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
sdkpvahvvanpqaegqlqwlllangvelrdnqlvvpseglyliysqvlfkgqgcpsthv
llthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqlekgdrlsa
einrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5mu8z_:

Click to download the PDB-style file with coordinates for d5mu8z_.
(The format of our PDB-style files is described here.)

Timeline for d5mu8z_:

  • d5mu8z_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-30