SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Clostridium thermocellum [TaxId: 1249482]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2012910Fold a.139: Type I dockerin domain [63445] (1 superfamily)
    tandem repeat of two calcium-binding loop-helix motifs, distinct from the EF-hand
  4. 2012911Superfamily a.139.1: Type I dockerin domain [63446] (2 families) (S)
  5. 2012929Family a.139.1.0: automated matches [191542] (1 protein)
    not a true family
  6. 2012930Protein automated matches [190928] (7 species)
    not a true protein
  7. 2289077Species Clostridium thermocellum [TaxId:1249482] [332378] (1 PDB entry)

PDB entry in Species: Clostridium thermocellum [TaxId: 1249482]:

More info for Species Clostridium thermocellum [TaxId:1249482] from a.139.1.0 automated matches

Timeline for Species Clostridium thermocellum [TaxId:1249482] from a.139.1.0 automated matches:

  • Species Clostridium thermocellum [TaxId:1249482] from a.139.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-30