SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5uwwb_ (5uww B:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2061576Fold b.55: PH domain-like barrel [50728] (2 superfamilies)
    barrel, partly opened; n*=6, S*=12; meander; capped by an alpha-helix
  4. 2061577Superfamily b.55.1: PH domain-like [50729] (14 families) (S)
  5. 2062158Family b.55.1.0: automated matches [191311] (1 protein)
    not a true family
  6. 2062159Protein automated matches [190052] (6 species)
    not a true protein
  7. 2062160Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [194506] (31 PDB entries)
  8. 2288989Domain d5uwwb_: 5uww B: [332290]
    Other proteins in same PDB: d5uwwa_
    automated match to d4wvfb_
    complexed with gnp, gol, mg; mutant

Details for d5uwwb_

PDB Entry: 5uww (more details), 2.15 Å

PDB Description: crystal structure of deaf1 peptide in complex with crm1 k579a mutant- ran-ranbp1
PDB Compounds: (B:) Ran-specific GTPase-activating protein 1

SCOPe Domain Sequences for d5uwwb_:

Sequence, based on SEQRES records: (download)

>d5uwwb_ b.55.1.0 (B:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
hfepvvhlekvdvktmeedeevlykvraklfrfdadakewkergtgdckflknkktnkvr
ilmrrdktlkicanhiiapeytlkpnvgsdrswvyactadiaegeaeaftfairfgsken
adkfkeefekaqeinkka

Sequence, based on observed residues (ATOM records): (download)

>d5uwwb_ b.55.1.0 (B:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
hfepvmeedeevlykvraklfrfdadakewkergtgdckflknkktnkvrilmrrdktlk
icanhiiapeytlkpnvgsdrswvyactadiaegeaeaftfairfgskenadkfkeefek
aqeinkka

SCOPe Domain Coordinates for d5uwwb_:

Click to download the PDB-style file with coordinates for d5uwwb_.
(The format of our PDB-style files is described here.)

Timeline for d5uwwb_:

  • d5uwwb_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-23