Lineage for d5v38a1 (5v38 A:863-1071)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2042196Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2042197Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2044115Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2044116Protein automated matches [190437] (53 species)
    not a true protein
  7. 2044196Species Clostridium botulinum [TaxId:1491] [225675] (23 PDB entries)
  8. 2288948Domain d5v38a1: 5v38 A:863-1071 [332249]
    Other proteins in same PDB: d5v38a2, d5v38b2
    automated match to d2vuaa1
    complexed with acy

Details for d5v38a1

PDB Entry: 5v38 (more details), 1.8 Å

PDB Description: crystal structure of the receptor-binding domain of botulinum neurotoxin type ha
PDB Compounds: (A:) HcHA

SCOPe Domain Sequences for d5v38a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5v38a1 b.29.1.0 (A:863-1071) automated matches {Clostridium botulinum [TaxId: 1491]}
yncilnikyemdrdklvdssgyrsrinigtgvkfseidknqvqlsnlesskievilnngv
iynsmyenfstsfwiripkyfrninneykiiscmqnnsgwevslnfsnmnskiiwtlqdt
egikktvvfqytqninisdyinrwifvtitnnrlsnskiyingrlineesisdlgnihas
nnimfkldgcrdphryiwikyfnlfdkel

SCOPe Domain Coordinates for d5v38a1:

Click to download the PDB-style file with coordinates for d5v38a1.
(The format of our PDB-style files is described here.)

Timeline for d5v38a1:

  • d5v38a1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-23

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Domains from same chain:
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d5v38a2