Lineage for d5u44b_ (5u44 B:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2008478Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 protein domains)
  6. 2009403Protein automated matches [190059] (14 species)
    not a true protein
  7. 2009425Species Human (Homo sapiens) [TaxId:9606] [187214] (173 PDB entries)
  8. 2288875Domain d5u44b_: 5u44 B: [332176]
    automated match to d2p4ya_
    complexed with 7sv, b7g, pgo

Details for d5u44b_

PDB Entry: 5u44 (more details), 2.15 Å

PDB Description: human ppardelta ligand-binding domain in complexed with specific agonist 13
PDB Compounds: (B:) Peroxisome proliferator-activated receptor delta

SCOPe Domain Sequences for d5u44b_:

Sequence, based on SEQRES records: (download)

>d5u44b_ a.123.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkql
vnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaif
amlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalf
iaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvt
ehaqmmqrikktetetslhpllqeiyk

Sequence, based on observed residues (ATOM records): (download)

>d5u44b_ a.123.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglglppy
keisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasiv
nkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilc
gdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmq
rikktetetslhpllqeiyk

SCOPe Domain Coordinates for d5u44b_:

Click to download the PDB-style file with coordinates for d5u44b_.
(The format of our PDB-style files is described here.)

Timeline for d5u44b_:

  • d5u44b_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-23