Lineage for d5u41a_ (5u41 A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2008478Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 protein domains)
  6. 2009403Protein automated matches [190059] (14 species)
    not a true protein
  7. 2009425Species Human (Homo sapiens) [TaxId:9606] [187214] (173 PDB entries)
  8. 2288850Domain d5u41a_: 5u41 A: [332151]
    automated match to d2p4ya_
    complexed with 7ug, b7g, k, peg, pgo

Details for d5u41a_

PDB Entry: 5u41 (more details), 1.9 Å

PDB Description: human ppardelta ligand-binding domain in complexed with specific agonist 16
PDB Compounds: (A:) Peroxisome proliferator-activated receptor delta

SCOPe Domain Sequences for d5u41a_:

Sequence, based on SEQRES records: (download)

>d5u41a_ a.123.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkqlvn
glppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifam
lasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfia
aiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvteh
aqmmqrikktetetslhpllqeiykd

Sequence, based on observed residues (ATOM records): (download)

>d5u41a_ a.123.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dlkafskhiynaylknfnmtkkkarsiltapfvihdietlwqaekglvwkqlvnglppyk
eisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasivn
kdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilcg
drpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmqr
ikktetetslhpllqeiykd

SCOPe Domain Coordinates for d5u41a_:

Click to download the PDB-style file with coordinates for d5u41a_.
(The format of our PDB-style files is described here.)

Timeline for d5u41a_:

  • d5u41a_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-23