SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5pdpa2 (5pdp A:1856-1857)

  1. Root: SCOPe 2.06
  2. 2245868Class l: Artifacts [310555] (1 fold)
  3. 2245869Fold l.1: Tags [310573] (1 superfamily)
  4. 2245870Superfamily l.1.1: Tags [310607] (1 family) (S)
  5. 2245871Family l.1.1.1: Tags [310682] (2 protein domains)
  6. 2251949Protein N-terminal Tags [310894] (1 species)
  7. 2251950Species Synthetic [311501] (10528 PDB entries)
  8. 2288702Domain d5pdpa2: 5pdp A:1856-1857 [332003]
    Other proteins in same PDB: d5pdpa1
    complexed with edo

Details for d5pdpa2

PDB Entry: 5pdp (more details), 1.7 Å

PDB Description: pandda analysis group deposition -- crystal structure of baz2b after initial refinement with no ligand modelled (structure 82)
PDB Compounds: (A:) Bromodomain adjacent to zinc finger domain protein 2B

SCOPe Domain Sequences for d5pdpa2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5pdpa2 l.1.1.1 (A:1856-1857) N-terminal Tags {Synthetic}
sm

SCOPe Domain Coordinates for d5pdpa2:

Click to download the PDB-style file with coordinates for d5pdpa2.
(The format of our PDB-style files is described here.)

Timeline for d5pdpa2:

  • d5pdpa2 appears in periodic updates to SCOPe 2.06 starting on 2017-03-23

View in 3D
Domains from same chain:
(mouse over for more information)
d5pdpa1