Lineage for d5pgba1 (5pgb A:1858-1970)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1992366Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 1992367Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. 1992467Family a.29.2.0: automated matches [191428] (1 protein)
    not a true family
  6. 1992468Protein automated matches [190615] (10 species)
    not a true protein
  7. 1992472Species Human (Homo sapiens) [TaxId:9606] [187641] (639 PDB entries)
  8. 2288667Domain d5pgba1: 5pgb A:1858-1970 [331968]
    Other proteins in same PDB: d5pgba2
    automated match to d3uv2a_
    complexed with edo

Details for d5pgba1

PDB Entry: 5pgb (more details), 1.57 Å

PDB Description: pandda analysis group deposition -- crystal structure of baz2b after initial refinement with no ligand modelled (structure 175)
PDB Compounds: (A:) Bromodomain adjacent to zinc finger domain protein 2B

SCOPe Domain Sequences for d5pgba1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5pgba1 a.29.2.0 (A:1858-1970) automated matches {Human (Homo sapiens) [TaxId: 9606]}
svkkpkrddskdlalcsmiltemethedawpfllpvnlklvpgykkvikkpmdfstirek
lssgqypnletfaldvrlvfdncetfneddsdigraghnmrkyfekkwtdtfk

SCOPe Domain Coordinates for d5pgba1:

Click to download the PDB-style file with coordinates for d5pgba1.
(The format of our PDB-style files is described here.)

Timeline for d5pgba1:

  • d5pgba1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-23

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Domains from same chain:
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d5pgba2