Lineage for d5pdha1 (5pdh A:1858-1970)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1992366Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 1992367Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. 1992467Family a.29.2.0: automated matches [191428] (1 protein)
    not a true family
  6. 1992468Protein automated matches [190615] (10 species)
    not a true protein
  7. 1992472Species Human (Homo sapiens) [TaxId:9606] [187641] (639 PDB entries)
  8. 2288540Domain d5pdha1: 5pdh A:1858-1970 [331841]
    Other proteins in same PDB: d5pdha2
    automated match to d3uv2a_
    complexed with edo

Details for d5pdha1

PDB Entry: 5pdh (more details), 1.78 Å

PDB Description: pandda analysis group deposition -- crystal structure of baz2b after initial refinement with no ligand modelled (structure 73)
PDB Compounds: (A:) Bromodomain adjacent to zinc finger domain protein 2B

SCOPe Domain Sequences for d5pdha1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5pdha1 a.29.2.0 (A:1858-1970) automated matches {Human (Homo sapiens) [TaxId: 9606]}
svkkpkrddskdlalcsmiltemethedawpfllpvnlklvpgykkvikkpmdfstirek
lssgqypnletfaldvrlvfdncetfneddsdigraghnmrkyfekkwtdtfk

SCOPe Domain Coordinates for d5pdha1:

Click to download the PDB-style file with coordinates for d5pdha1.
(The format of our PDB-style files is described here.)

Timeline for d5pdha1:

  • d5pdha1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-23

View in 3D
Domains from same chain:
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d5pdha2