Lineage for d5b3ss_ (5b3s S:)

  1. Root: SCOPe 2.06
  2. 2229111Class g: Small proteins [56992] (94 folds)
  3. 2235033Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 2235239Superfamily g.41.5: Rubredoxin-like [57802] (4 families) (S)
  5. 2235401Family g.41.5.3: Cytochrome c oxidase Subunit F [57818] (2 protein domains)
    membrane-anchored rubredoxin-like domain
    automatically mapped to Pfam PF01215
  6. 2235402Protein Cytochrome c oxidase Subunit F [57819] (1 species)
  7. 2235403Species Cow (Bos taurus) [TaxId:9913] [57820] (35 PDB entries)
  8. 2288422Domain d5b3ss_: 5b3s S: [331723]
    Other proteins in same PDB: d5b3sa1, d5b3sa2, d5b3sb1, d5b3sb2, d5b3sb3, d5b3sc_, d5b3sd_, d5b3se_, d5b3sg_, d5b3sh_, d5b3si1, d5b3si2, d5b3sj_, d5b3sk_, d5b3sl_, d5b3sm_, d5b3sn1, d5b3sn2, d5b3so1, d5b3so2, d5b3so3, d5b3sp_, d5b3sq_, d5b3sr_, d5b3st_, d5b3su_, d5b3sv1, d5b3sv2, d5b3sw_, d5b3sx_, d5b3sy_, d5b3sz_
    automated match to d1v54f_
    complexed with cdl, chd, cmo, cu, cua, dmu, edo, hea, mg, na, pek, pgv, psc, tgl, zn

Details for d5b3ss_

PDB Entry: 5b3s (more details), 1.68 Å

PDB Description: bovine heart cytochrome c oxidase in the carbon monoxide-bound mixed- valence state at 1.68 angstrom resolution (50 k)
PDB Compounds: (S:) cytochrome c oxidase subunit 5b, mitochondrial

SCOPe Domain Sequences for d5b3ss_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5b3ss_ g.41.5.3 (S:) Cytochrome c oxidase Subunit F {Cow (Bos taurus) [TaxId: 9913]}
asgggvptdeeqatglerevmlaarkgqdpynilapkatsgtkedpnlvpsitnkrivgc
iceednstviwfwlhkgeaqrcpscgthyklvph

SCOPe Domain Coordinates for d5b3ss_:

Click to download the PDB-style file with coordinates for d5b3ss_.
(The format of our PDB-style files is described here.)

Timeline for d5b3ss_:

  • d5b3ss_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-23