SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5ixga_ (5ixg A:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2063610Fold b.61: Streptavidin-like [50875] (8 superfamilies)
    barrel, closed; n=8, S=10; meander
  4. 2064238Superfamily b.61.6: YceI-like [101874] (2 families) (S)
  5. 2064250Family b.61.6.0: automated matches [191627] (1 protein)
    not a true family
  6. 2064251Protein automated matches [191150] (2 species)
    not a true protein
  7. 2288361Species Burkholderia cenocepacia [TaxId:350702] [331662] (1 PDB entry)
  8. 2288362Domain d5ixga_: 5ixg A: [331663]
    automated match to d1y0ga_
    complexed with otp, peg

Details for d5ixga_

PDB Entry: 5ixg (more details), 1.6 Å

PDB Description: crystal structure of burkholderia cenocepacia bcnb
PDB Compounds: (A:) YceI

SCOPe Domain Sequences for d5ixga_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ixga_ b.61.6.0 (A:) automated matches {Burkholderia cenocepacia [TaxId: 350702]}
atyqfdpshtypsfeadhfgglsvwrgkfdkssgtvtldraaktgtvdvttdiasihtgs
akldehlqtaeffdaakfpqanykgtikfdgdkpvsvvgnltlhgvtkpltlkidsfkcm
phpmlkrevcgvdavgefsrddfgldygkqygfkmktkllitaeavkq

SCOPe Domain Coordinates for d5ixga_:

Click to download the PDB-style file with coordinates for d5ixga_.
(The format of our PDB-style files is described here.)

Timeline for d5ixga_:

  • d5ixga_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-23