Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3002785Fold d.170: SRCR-like [56486] (2 superfamilies)
    unusual fold; disulfide-rich; core: beta-x-alpha-beta-loop-beta
  4. 3002786Superfamily d.170.1: SRCR-like [56487] (3 families) (S)
  5. 3002798Family d.170.1.0: automated matches [331628] (1 protein)
    not a true family
  6. 3002799Protein automated matches [331629] (4 species)
    not a true protein

Species:

  1. 3002800Chlorocebus aethiops [TaxId:9534] [385360] (1 PDB entry)
  2. 3002803Human (Homo sapiens) [TaxId:9606] [382368] (6 PDB entries)
    1. Domains for 6k0o:
      1. 3002810Domain d6k0oa1: 6k0o A:795-895 [385325]
        Other proteins in same PDB: d6k0oa2, d6k0oa3, d6k0ob2, d6k0ob3
        automated match to d5hrja_
      2. 3002811Domain d6k0ob1: 6k0o B:795-895 [385456]
        Other proteins in same PDB: d6k0oa2, d6k0oa3, d6k0ob2, d6k0ob3
        automated match to d5hrja_
    2. Domain for 6sa4:
    3. Domain for 6sa5:
    4. Domains for 6san:
      1. 3002805Domain d6sana1: 6san A:986-1094 [382370]
        Other proteins in same PDB: d6sana2, d6sanb2
        automated match to d1by2a_
        complexed with cl, gol, mg
      2. 3002806Domain d6sanb1: 6san B:986-1094 [382369]
        Other proteins in same PDB: d6sana2, d6sanb2
        automated match to d1by2a_
        complexed with cl, gol, mg
    5. Domain for 7c00:
    6. Domain for 7dpx:
  3. 3002812Mouse (Mus musculus) [TaxId:10090] [346392] (5 PDB entries)
    1. Domain for 2oy3:
    2. Domains for 2oya:
      1. 3002813Domain d2oyaa1: 2oya A:421-518 [344622]
        Other proteins in same PDB: d2oyaa2, d2oyab2
        automated match to d5hrja_
        complexed with so4
      2. 3002814Domain d2oyab1: 2oya B:421-518 [344624]
        Other proteins in same PDB: d2oyaa2, d2oyab2
        automated match to d5hrja_
        complexed with so4
    3. Domains for 6h8m:
      1. 3002816Domain d6h8ma_: 6h8m A: [365081]
        automated match to d1by2a_
      2. 3002817Domain d6h8mb_: 6h8m B: [365099]
        automated match to d1by2a_
    4. Domains for 6j02:
      1. 3002818Domain d6j02a_: 6j02 A: [376684]
        automated match to d1by2a_
        complexed with ca
      2. 3002819Domain d6j02b_: 6j02 B: [376697]
        automated match to d1by2a_
        complexed with ca
    5. Domains for 7bzz:
      1. 3002820Domain d7bzza1: 7bzz A:384-489 [389740]
        Other proteins in same PDB: d7bzza2, d7bzzd2
        automated match to d1by2a_
        complexed with ca, nag
      2. 3002821Domain d7bzzd1: 7bzz D:384-489 [389780]
        Other proteins in same PDB: d7bzza2, d7bzzd2
        automated match to d1by2a_
        complexed with ca, nag
  4. 3002822Pig (Sus scrofa) [TaxId:9823] [331630] (2 PDB entries)
    1. Domain for 5hrj:
    2. Domain for 5jfb:

More info for Protein automated matches from d.170.1.0: automated matches

Timeline for Protein automated matches from d.170.1.0: automated matches: