SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5tztl2 (5tzt L:113-219)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2026644Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2026645Protein automated matches [190740] (25 species)
    not a true protein
  7. 2026747Species Human (Homo sapiens) [TaxId:9606] [187920] (831 PDB entries)
  8. 2288249Domain d5tztl2: 5tzt L:113-219 [331550]
    automated match to d3aazb2
    complexed with gol, nag

Details for d5tztl2

PDB Entry: 5tzt (more details), 2.89 Å

PDB Description: crystal structure of human cd47 ecd bound to fab of c47b161
PDB Compounds: (L:) Light Chain of Fab C47B161

SCOPe Domain Sequences for d5tztl2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5tztl2 b.1.1.0 (L:113-219) automated matches {Human (Homo sapiens) [TaxId: 9606]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

SCOPe Domain Coordinates for d5tztl2:

Click to download the PDB-style file with coordinates for d5tztl2.
(The format of our PDB-style files is described here.)

Timeline for d5tztl2:

  • d5tztl2 appears in periodic updates to SCOPe 2.06 starting on 2017-03-16

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Domains from same chain:
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d5tztl1