SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5tppl2 (5tpp L:112-214)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2026644Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2026645Protein automated matches [190740] (25 species)
    not a true protein
  7. 2026747Species Human (Homo sapiens) [TaxId:9606] [187920] (831 PDB entries)
  8. 2288188Domain d5tppl2: 5tpp L:112-214 [331489]
    automated match to d1etza2
    complexed with cit, na

Details for d5tppl2

PDB Entry: 5tpp (more details), 1.85 Å

PDB Description: crystal structure of dh270.5 (unliganded) from the dh270 broadly neutralizing n332-glycan dependent lineage
PDB Compounds: (L:) DH270.5 Fab heavy chain

SCOPe Domain Sequences for d5tppl2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5tppl2 b.1.1.0 (L:112-214) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qpkgapsvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskq
snnkyaassylsltpeqwkshrsyscqvthegstvektvapte

SCOPe Domain Coordinates for d5tppl2:

Click to download the PDB-style file with coordinates for d5tppl2.
(The format of our PDB-style files is described here.)

Timeline for d5tppl2:

  • d5tppl2 appears in periodic updates to SCOPe 2.06 starting on 2017-03-16