SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5mija_ (5mij A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1988415Family a.25.1.1: Ferritin [47241] (10 protein domains)
  6. 1988416Protein (Apo)ferritin [47246] (8 species)
  7. 1988470Species Horse (Equus caballus), L chain [TaxId:9796] [47248] (65 PDB entries)
  8. 2287778Domain d5mija_: 5mij A: [331079]
    automated match to d1iera_
    complexed with cd, cl, pt, so4

Details for d5mija_

PDB Entry: 5mij (more details), 1.49 Å

PDB Description: x-ray structure of carboplatin-encapsulated horse spleen apoferritin
PDB Compounds: (A:) ferritin light chain

SCOPe Domain Sequences for d5mija_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5mija_ a.25.1.1 (A:) (Apo)ferritin {Horse (Equus caballus), L chain [TaxId: 9796]}
ssqirqnysteveaavnrlvnlylrasytylslgfyfdrddvalegvchffrelaeekre
gaerllkmqnqrggralfqdlqkpsqdewgttldamkaaivlekslnqalldlhalgsaq
adphlcdfleshfldeevklikkmgdhltniqrlvgsqaglgeylferltlk

SCOPe Domain Coordinates for d5mija_:

Click to download the PDB-style file with coordinates for d5mija_.
(The format of our PDB-style files is described here.)

Timeline for d5mija_:

  • d5mija_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-16