SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5hzta_ (5hzt A:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164731Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2164732Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2165335Family d.22.1.0: automated matches [191400] (1 protein)
    not a true family
  6. 2165336Protein automated matches [190526] (21 species)
    not a true protein
  7. 2165406Species Echinophyllia sp. [TaxId:301887] [188534] (16 PDB entries)
  8. 2287776Domain d5hzta_: 5hzt A: [331077]
    automated match to d2gx2a_
    complexed with cu

Details for d5hzta_

PDB Entry: 5hzt (more details), 2.84 Å

PDB Description: crystal structure of dronpa-cu2+
PDB Compounds: (A:) Fluorescent protein Dronpa

SCOPe Domain Sequences for d5hzta_:

Sequence, based on SEQRES records: (download)

>d5hzta_ d.22.1.0 (A:) automated matches {Echinophyllia sp. [TaxId: 301887]}
vikpdmkiklrmegavnghpfaiegvglgkpfegkqsmdlkvkeggplpfaydilttvfs
ygnrvfakypenivdyfkqsfpegyswersmnyedggicnatnditldgdcyiyeirfdg
vnfpangpvmqkrtvkwepsteklyvrdgvlkgdvnmalsleggghyrcdfkttykakkv
vqlpdyhfvdhhieikshdkdysnvnlhehaeahse

Sequence, based on observed residues (ATOM records): (download)

>d5hzta_ d.22.1.0 (A:) automated matches {Echinophyllia sp. [TaxId: 301887]}
vikpdmkiklrmegavnghpfaiegvglgkpfegkqsmdlkvkeggplpfaydilttvfs
ygnrvfakyegyswersmnyedggicnatnditldgdcyiyeirfdgvnfpangpvmqkr
tvkwepsteklyvrdgvlkgdvnmalsleggghyrcdfkttykakhfvdhhieikshdkd
ysnvnlhehaeahse

SCOPe Domain Coordinates for d5hzta_:

Click to download the PDB-style file with coordinates for d5hzta_.
(The format of our PDB-style files is described here.)

Timeline for d5hzta_:

  • d5hzta_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-16