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Lineage for d5ik3b2 (5ik3 B:127-234)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2024392Protein automated matches [190374] (14 species)
    not a true protein
  7. 2024406Species Human (Homo sapiens) [TaxId:9606] [187221] (624 PDB entries)
  8. 2287757Domain d5ik3b2: 5ik3 B:127-234 [331058]
    Other proteins in same PDB: d5ik3b1, d5ik3d1
    automated match to d1dn0a2
    complexed with so4

Details for d5ik3b2

PDB Entry: 5ik3 (more details), 1.65 Å

PDB Description: crystal structure of anti-gliadin 1002-1e03 fab fragment
PDB Compounds: (B:) 1E03 Fab fragment light chain

SCOPe Domain Sequences for d5ik3b2:

Sequence, based on SEQRES records: (download)

>d5ik3b2 b.1.1.2 (B:127-234) automated matches {Human (Homo sapiens) [TaxId: 9606]}
krtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteq
dskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

Sequence, based on observed residues (ATOM records): (download)

>d5ik3b2 b.1.1.2 (B:127-234) automated matches {Human (Homo sapiens) [TaxId: 9606]}
krtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteq
dskdstyslsstltlskadyekhvyacevthqglsspvtksfnrgec

SCOPe Domain Coordinates for d5ik3b2:

Click to download the PDB-style file with coordinates for d5ik3b2.
(The format of our PDB-style files is described here.)

Timeline for d5ik3b2:

  • d5ik3b2 appears in periodic updates to SCOPe 2.06 starting on 2017-03-16

View in 3D
Domains from same chain:
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d5ik3b1