SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5hzsl_ (5hzs L:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164731Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2164732Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2165335Family d.22.1.0: automated matches [191400] (1 protein)
    not a true family
  6. 2165336Protein automated matches [190526] (21 species)
    not a true protein
  7. 2165406Species Echinophyllia sp. [TaxId:301887] [188534] (16 PDB entries)
  8. 2287745Domain d5hzsl_: 5hzs L: [331046]
    automated match to d2gx2a_
    complexed with co

Details for d5hzsl_

PDB Entry: 5hzs (more details), 2.17 Å

PDB Description: crystal structure of dronpa-co2+
PDB Compounds: (L:) Fluorescent protein Dronpa

SCOPe Domain Sequences for d5hzsl_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5hzsl_ d.22.1.0 (L:) automated matches {Echinophyllia sp. [TaxId: 301887]}
vikpdmkiklrmegavnghpfaiegvglgkpfegkqsmdlkvkeggplpfaydilttvfs
ygnrvfakypenivdyfkqsfpegyswersmnyedggicnatnditldgdcyiyeirfdg
vnfpangpvmqkrtvkwepsteklyvrdgvlkgdvnmalsleggghyrcdfkttykakkv
vqlpdyhfvdhhieikshdkdysnvnlhehaeahse

SCOPe Domain Coordinates for d5hzsl_:

Click to download the PDB-style file with coordinates for d5hzsl_.
(The format of our PDB-style files is described here.)

Timeline for d5hzsl_:

  • d5hzsl_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-16