SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Limnothrix sp. [TaxId: 1162714]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1990501Family a.25.1.6: PMT1231-like [158402] (2 protein domains)
    PfamB PB016165
    automatically mapped to Pfam PF11266
  6. 1990512Protein automated matches [261918] (4 species)
    not a true protein
  7. 2287742Species Limnothrix sp. [TaxId:1162714] [331043] (1 PDB entry)

PDB entry in Species: Limnothrix sp. [TaxId: 1162714]:

More info for Species Limnothrix sp. [TaxId:1162714] from a.25.1.6 automated matches

Timeline for Species Limnothrix sp. [TaxId:1162714] from a.25.1.6 automated matches:

  • Species Limnothrix sp. [TaxId:1162714] from a.25.1.6 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-16