SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Enterococcus faecalis [TaxId: 226185]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2213792Fold d.224: SufE/NifU [82648] (1 superfamily)
    alpha(2)-beta(3)-alpha(3); 2 layers alpha/beta, 3-stranded antiparallel beta-sheet; order 123
  4. 2213793Superfamily d.224.1: SufE/NifU [82649] (4 families) (S)
    iron-sulfur cluster assembly proteins
  5. 2213847Family d.224.1.0: automated matches [191547] (1 protein)
    not a true family
  6. 2213848Protein automated matches [190942] (5 species)
    not a true protein
  7. 2287680Species Enterococcus faecalis [TaxId:226185] [330981] (5 PDB entries)

PDB entries in Species: Enterococcus faecalis [TaxId: 226185]:

  1. Domain(s) for 5iby:
  2. Domain(s) for 5ich:
    1. 2287681Domain d5icha2: 5ich A:248-334 [330982]
      Other proteins in same PDB: d5icha1, d5icha3, d5ichb1, d5ichb3
      automated match to d1vqza1
      complexed with sh5
    2. 2288104Domain d5ichb2: 5ich B:248-334 [331405]
      Other proteins in same PDB: d5icha1, d5icha3, d5ichb1, d5ichb3
      automated match to d1vqza1
  3. Domain(s) for 5icl:
    1. 2287753Domain d5icla2: 5icl A:248-334 [331054]
      Other proteins in same PDB: d5icla1, d5icla3, d5iclb1, d5iclb3
      automated match to d1vqza1
      complexed with laq
    2. 2287948Domain d5iclb2: 5icl B:248-334 [331249]
      Other proteins in same PDB: d5icla1, d5icla3, d5iclb1, d5iclb3
      automated match to d1vqza1
      complexed with laq
  4. Domain(s) for 5idh:
  5. Domain(s) for 5ij6:

More info for Species Enterococcus faecalis [TaxId:226185] from d.224.1.0 automated matches

Timeline for Species Enterococcus faecalis [TaxId:226185] from d.224.1.0 automated matches:

  • Species Enterococcus faecalis [TaxId:226185] from d.224.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-16