SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Enterococcus faecalis [TaxId: 226185]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2186950Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
    contains large mixed beta-sheet
  4. 2186951Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families) (S)
  5. 2187333Family d.104.1.0: automated matches [227172] (1 protein)
    not a true family
  6. 2187334Protein automated matches [226887] (11 species)
    not a true protein
  7. 2287678Species Enterococcus faecalis [TaxId:226185] [330979] (5 PDB entries)

PDB entries in Species: Enterococcus faecalis [TaxId: 226185]:

  1. Domain(s) for 5iby:
  2. Domain(s) for 5ich:
    1. 2287679Domain d5icha1: 5ich A:1-247 [330980]
      Other proteins in same PDB: d5icha2, d5icha3, d5ichb2, d5ichb3
      automated match to d1vqza2
      complexed with sh5
    2. 2288103Domain d5ichb1: 5ich B:1-247 [331404]
      Other proteins in same PDB: d5icha2, d5icha3, d5ichb2, d5ichb3
      automated match to d1vqza2
      complexed with sh5
  3. Domain(s) for 5icl:
    1. 2287752Domain d5icla1: 5icl A:1-247 [331053]
      Other proteins in same PDB: d5icla2, d5icla3, d5iclb2, d5iclb3
      automated match to d1vqza2
      complexed with laq
    2. 2287947Domain d5iclb1: 5icl B:1-247 [331248]
      Other proteins in same PDB: d5icla2, d5icla3, d5iclb2, d5iclb3
      automated match to d1vqza2
      complexed with laq
  4. Domain(s) for 5idh:
  5. Domain(s) for 5ij6:

More info for Species Enterococcus faecalis [TaxId:226185] from d.104.1.0 automated matches

Timeline for Species Enterococcus faecalis [TaxId:226185] from d.104.1.0 automated matches:

  • Species Enterococcus faecalis [TaxId:226185] from d.104.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-16