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Lineage for Species: Vibrio vulnificus [TaxId: 672]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (136 species)
    not a true protein
  7. 2287663Species Vibrio vulnificus [TaxId:672] [330964] (4 PDB entries)

PDB entries in Species: Vibrio vulnificus [TaxId: 672]:

  1. Domain(s) for 5b70:
    1. 2287666Domain d5b70c1: 5b70 C:86-301 [330967]
      Other proteins in same PDB: d5b70a2, d5b70b2, d5b70c2, d5b70d2
      automated match to d1i6aa_
      complexed with gol
    2. 2287667Domain d5b70b1: 5b70 B:86-301 [330968]
      Other proteins in same PDB: d5b70a2, d5b70b2, d5b70c2, d5b70d2
      automated match to d1i6aa_
      complexed with gol
    3. 2287696Domain d5b70a1: 5b70 A:96-301 [330997]
      Other proteins in same PDB: d5b70a2, d5b70b2, d5b70c2, d5b70d2
      automated match to d1i6aa_
      complexed with gol
    4. 2287738Domain d5b70d1: 5b70 D:86-301 [331039]
      Other proteins in same PDB: d5b70a2, d5b70b2, d5b70c2, d5b70d2
      automated match to d1i6aa_
      complexed with gol
  2. Domain(s) for 5b7d:
    1. 2287668Domain d5b7da1: 5b7d A:86-301 [330969]
      Other proteins in same PDB: d5b7da2, d5b7db2
      automated match to d1i6aa_
      complexed with so4; mutant
    2. 2287687Domain d5b7db1: 5b7d B:86-301 [330988]
      Other proteins in same PDB: d5b7da2, d5b7db2
      automated match to d1i6aa_
      complexed with so4; mutant
  3. Domain(s) for 5x0q:
    1. 2288189Domain d5x0qa1: 5x0q A:86-301 [331490]
      Other proteins in same PDB: d5x0qa2, d5x0qb2
      automated match to d1i6aa_
      complexed with cit, cl
    2. 2288194Domain d5x0qb1: 5x0q B:86-301 [331495]
      Other proteins in same PDB: d5x0qa2, d5x0qb2
      automated match to d1i6aa_
      complexed with cit, cl
  4. Domain(s) for 5x0v:
    1. 2288236Domain d5x0vb1: 5x0v B:86-301 [331537]
      Other proteins in same PDB: d5x0va2, d5x0vb2
      automated match to d1i6aa_
      complexed with cit, cl
    2. 2288262Domain d5x0va1: 5x0v A:86-301 [331563]
      Other proteins in same PDB: d5x0va2, d5x0vb2
      automated match to d1i6aa_
      complexed with cit, cl

More info for Species Vibrio vulnificus [TaxId:672] from c.94.1.0 automated matches

Timeline for Species Vibrio vulnificus [TaxId:672] from c.94.1.0 automated matches:

  • Species Vibrio vulnificus [TaxId:672] from c.94.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-16