SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5uxza1 (5uxz A:4-291)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2134062Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
  4. 2134063Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families) (S)
    many members have left-handed crossover connection between strand 8 and additional strand 9
  5. 2134682Family c.69.1.8: Haloalkane dehalogenase [53513] (2 protein domains)
  6. 2134722Protein automated matches [190880] (5 species)
    not a true protein
  7. 2134728Species Rhodococcus rhodochrous [TaxId:1829] [189127] (13 PDB entries)
  8. 2287620Domain d5uxza1: 5uxz A:4-291 [330921]
    Other proteins in same PDB: d5uxza2, d5uxzb2
    automated match to d1cqwa_
    complexed with 8pm, cl, edo

Details for d5uxza1

PDB Entry: 5uxz (more details), 1.92 Å

PDB Description: x-ray crystal structure of halotag bound to the p9 benzothiadiazole fluorogenic ligand
PDB Compounds: (A:) haloalkane dehalogenase

SCOPe Domain Sequences for d5uxza1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5uxza1 c.69.1.8 (A:4-291) automated matches {Rhodococcus rhodochrous [TaxId: 1829]}
igtgfpfdphyvevlgermhyvdvgprdgtpvlflhgnptssyvwrniiphvapthrcia
pdligmgksdkpdlgyffddhvrfmdafiealgleevvlvihdwgsalgfhwakrnperv
kgiafmefirpiptwdewpefaretfqafrttdvgrkliidqnvfiegtlpmgvvrplte
vemdhyrepflnpvdreplwrfpnelpiagepanivalveeymdwlhqspvpkllfwgtp
gvlippaeaarlakslpnckavdigpglnllqednpdligseiarwls

SCOPe Domain Coordinates for d5uxza1:

Click to download the PDB-style file with coordinates for d5uxza1.
(The format of our PDB-style files is described here.)

Timeline for d5uxza1:

  • d5uxza1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-09

View in 3D
Domains from same chain:
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d5uxza2