SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Pseudanabaena sp. [TaxId: 1357935]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1976410Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1976411Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1978832Family a.1.1.3: Phycocyanin-like phycobilisome proteins [46532] (7 protein domains)
    oligomers of two different types of globin-like subunits containing two extra helices at the N-terminus
    binds a bilin chromophore
    automatically mapped to Pfam PF00502
  6. 1979007Protein automated matches [190531] (18 species)
    not a true protein
  7. 2287483Species Pseudanabaena sp. [TaxId:1357935] [330784] (1 PDB entry)

PDB entry in Species: Pseudanabaena sp. [TaxId: 1357935]:

More info for Species Pseudanabaena sp. [TaxId:1357935] from a.1.1.3 automated matches

Timeline for Species Pseudanabaena sp. [TaxId:1357935] from a.1.1.3 automated matches:

  • Species Pseudanabaena sp. [TaxId:1357935] from a.1.1.3 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-09