SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Alcaligenes xylosoxydans [TaxId: 85698]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987359Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1987402Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. 1987554Family a.24.3.2: Cytochrome c'-like [47179] (3 protein domains)
    automatically mapped to Pfam PF01322
  6. 1987599Protein automated matches [190363] (5 species)
    not a true protein
  7. 2287374Species Alcaligenes xylosoxydans [TaxId:85698] [330675] (7 PDB entries)

PDB entries in Species: Alcaligenes xylosoxydans [TaxId: 85698]:

  1. Domain(s) for 5jp7:
  2. Domain(s) for 5jra:
  3. Domain(s) for 5js5:
  4. Domain(s) for 5jsl:
  5. Domain(s) for 5jt4:
  6. Domain(s) for 5jua:
  7. Domain(s) for 5jve:

More info for Species Alcaligenes xylosoxydans [TaxId:85698] from a.24.3.2 automated matches

Timeline for Species Alcaligenes xylosoxydans [TaxId:85698] from a.24.3.2 automated matches:

  • Species Alcaligenes xylosoxydans [TaxId:85698] from a.24.3.2 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-08