SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5iolg1 (5iol G:2-149)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2173863Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (2 families) (S)
  5. 2173864Family d.58.6.1: Nucleoside diphosphate kinase, NDK [54920] (2 protein domains)
  6. 2174114Protein automated matches [190032] (18 species)
    not a true protein
  7. 2287358Species Schistosoma mansoni [TaxId:6183] [330659] (2 PDB entries)
  8. 2287372Domain d5iolg1: 5iol G:2-149 [330673]
    Other proteins in same PDB: d5iola2, d5iolb2, d5iolc2, d5iold2, d5iole2, d5iolf2, d5iolg2, d5iolh2, d5ioli2, d5iolj2, d5iolk2, d5ioll2
    automated match to d5bxib_

Details for d5iolg1

PDB Entry: 5iol (more details), 1.74 Å

PDB Description: crystal structure of nucleoside diphosphate kinase from schistosoma mansoni
PDB Compounds: (G:) Nucleoside diphosphate kinase

SCOPe Domain Sequences for d5iolg1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5iolg1 d.58.6.1 (G:2-149) automated matches {Schistosoma mansoni [TaxId: 6183]}

SCOPe Domain Coordinates for d5iolg1:

Click to download the PDB-style file with coordinates for d5iolg1.
(The format of our PDB-style files is described here.)

Timeline for d5iolg1:

  • d5iolg1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-08