SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Oryza sativa [TaxId: 4530]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2045654Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2047511Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 2047686Family b.34.13.0: automated matches [191621] (1 protein)
    not a true family
  6. 2047687Protein automated matches [191139] (4 species)
    not a true protein
  7. 2287238Species Oryza sativa [TaxId:4530] [330539] (1 PDB entry)

PDB entry in Species: Oryza sativa [TaxId: 4530]:

More info for Species Oryza sativa [TaxId:4530] from b.34.13.0 automated matches

Timeline for Species Oryza sativa [TaxId:4530] from b.34.13.0 automated matches:

  • Species Oryza sativa [TaxId:4530] from b.34.13.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-02