SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Bordetella pertussis [TaxId: 257313]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105373Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2106293Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families) (S)
    share similar mode of ligand (Adenosine group) binding
    can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group
  5. 2106562Family c.26.2.0: automated matches [191320] (1 protein)
    not a true family
  6. 2106563Protein automated matches [190116] (22 species)
    not a true protein
  7. 2287232Species Bordetella pertussis [TaxId:257313] [330533] (1 PDB entry)

PDB entry in Species: Bordetella pertussis [TaxId: 257313]:

More info for Species Bordetella pertussis [TaxId:257313] from c.26.2.0 automated matches

Timeline for Species Bordetella pertussis [TaxId:257313] from c.26.2.0 automated matches:

  • Species Bordetella pertussis [TaxId:257313] from c.26.2.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-02